PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN16278.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 219aa    MW: 23808.7 Da    PI: 6.8869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN16278.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-11100147455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  KHN16278.1 100 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 147
                 8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-1894165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.45E-1194151No hitNo description
Gene3DG3DSA:4.10.280.101.7E-1896166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82896146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-8100147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10102152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDPPLISDST FSPAYSLAEI WPGMPHFPDH SHLTATANDS GSNKRMKVGG SSFENDGFKA  60
EAEASSVGGN KSSEQSNKPC EAPKPDYIHV RARRGQATDS HSLAERARRE KISERMKILQ  120
DLVPGCNKVI GKALVLDEII NYIQSLQRQV EFLSMKLEAV NSRMNTNPTI DGFPSKDVGT  180
QPFDIAGMVF GSQAARGYAQ GSSHPGWLHM QIGGGFETT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0908470.0BT090847.1 Soybean clone JCVI-FLGm-5B17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006577768.11e-160PREDICTED: uncharacterized protein LOC100306638 isoform X1
SwissprotQ9LV172e-66BH079_ARATH; Transcription factor bHLH79
TrEMBLA0A0B2Q8F41e-165A0A0B2Q8F4_GLYSO; Transcription factor bHLH79
STRINGGLYMA04G34660.11e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-75BIG PETAL P
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]